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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs2275426 1 rs4660910 chr1:46548402 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs4663866 1 rs4663300 chr2:239181491 LOC151174 chr2:239133754-239140318:- 0.89 4.51 1.84E-5 Irritable bowel syndrome
THYM cis rs4663866 1 rs4663865 chr2:239145960 LOC151174 chr2:239133754-239140318:- -0.93 -4.67 9.96E-6 Irritable bowel syndrome
THYM cis rs4663866 1 rs4663866 chr2:239150815 LOC151174 chr2:239133754-239140318:- 0.93 4.57 1.47E-5 Irritable bowel syndrome
THYM cis rs4663866 1 rs4663867 chr2:239159964 LOC151174 chr2:239133754-239140318:- 0.93 4.57 1.47E-5 Irritable bowel syndrome
THYM cis rs4663866 1 rs4663868 chr2:239161091 LOC151174 chr2:239133754-239140318:- 0.93 4.57 1.47E-5 Irritable bowel syndrome
THYM cis rs4372836 1 rs4666118 chr2:28951698 TRMT61B chr2:29072690-29093175:- -0.5 -4.13 7.81E-5 Body mass index
THYM cis rs4372836 1 rs4666119 chr2:28975690 TRMT61B chr2:29072690-29093175:- -0.52 -4.34 3.54E-5 Body mass index
THYM cis rs2243480 1 rs466983 chr7:65520496 CCT6P1 chr7:65216092-65228661:+ 0.67 5.68 1.48E-7 Diabetic kidney disease
THYM cis rs3820928 1 rs4673173 chr2:227769493 RHBDD1 chr2:227700773-227861591:+ -0.31 -4.5 1.92E-5 Pulmonary function
THYM cis rs3820928 1 rs4675115 chr2:227769123 RHBDD1 chr2:227700773-227861591:+ -0.33 -4.92 3.62E-6 Pulmonary function
THYM cis rs3820928 1 rs4675116 chr2:227769607 RHBDD1 chr2:227700773-227861591:+ -0.31 -4.56 1.54E-5 Pulmonary function
THYM cis rs3820928 1 rs4675119 chr2:227774635 RHBDD1 chr2:227700773-227861591:+ -0.31 -4.59 1.34E-5 Pulmonary function
THYM cis rs3820928 1 rs4675120 chr2:227774888 RHBDD1 chr2:227700773-227861591:+ -0.31 -4.54 1.63E-5 Pulmonary function
THYM cis rs2564921 1 rs4687701 chr3:53121276 RFT1 chr3:53122503-53164470:- 0.48 5.18 1.23E-6 Height